So the change in cutting performance occurred after you sharpened??
This would indicate a technique issue, and the problem you describe will occur when one side of the cutters are sharper/longer than the other side. You may benefit from a manual sharpening guide, that controls depth, and helps you with maintaining angles more uniformily. An issue that occurs with high speed stones of tiny diameter, is the pores of the stones 'load up' with material, so you may have done one side/set of cutters, then gone to the other side, and the stone was toooo smooth to sharpen efficiently. Try using a fresh stone for each side, then cut some wood and see if there is a difference, it's one way to pinpoint a technique issue.
As others have mentioned, bar rails could also be a culprit, check the rails for burrs, and uneven wear, left rail vs. right rail.
Dressing the bar to even out the rails will help eliminate possible problems/causes, and is part of good maintenance practices. It would behoove you to become proficient at this as well as cutter sharpness.
Keep at it, and you will figure it out, we've all been there.