Go ahead, try the 0.5mm gasket and measure the squish, if it comes to 0.9mm (0.035") then go with that if you are happy, I'd say you could go somewhere between 0.6mm and 0.9mm.
Remember to check squish on at least the front and back at the same time, if you just measure one point front or back, the piston will tilt inside the cylinder and your squish will seem less. Four points is best, you can place four small cuts of solder on top of your piston and use a small dab of grease to keep them in place, install your cylinder then give it a crank, disassemble and measure the solder depth.
http://www.arboristsite.com/showthread.php?t=58455 is a good read for making different depth base gaskets to suit and I can vouch for the Copper Silicone spray method.