1. Stock 340 carb and stock 346 carb can be used with all new parts ordered from above? It appears so but just want to make sure. Yes any of the carbs will work from this family. Some may say one carb works better than another but I do not know. My 345 converted to ported 346 OE with a stock 345 carb was an absolute screamer until it ingested something.
2. no factory gaskets to be used between bearing cup and cylinder or bearing cup and crank- yamabond or equivalent high quality sealer between both? Said yamabond because that’s what i have a tube of, if there is something better please let me know. Yes, should be fine. Be sure you do not goop over the impulse hole (I haven't had one apart in some time so not sure exactly where it is.)
3. I’m assuming the above set up has an impulse path? Yes
4. Crank seals- this saw looks to be 90s, but dont have the SN yet, should i just replace as I’m doing this? Not touch, seal and bolt everything and pressure/vac test? Looking at pictures above, Do they (crank seal) simply seal by tight tolerance machining or do they need sealer applied as well? noticed some ribs on them. Definitely replace the crank seals. They are cheap and easy to do.
5. The muffler- opening it? The vaguest response that makes sense please. It will run much better with a muffler mod and timing advance. Lots of threads on here of various muffler mods. The cheapest way is to "swiss cheese" the front of the muffler but looks kind of redneck. Or you could weld/braze in a new outlet and widen the existing one. Please note that several small holes will flow just as well as one large one, and the saw will be quieter and way less "crackly".
6. part numbers for changing to adjustable oiler? Not sure but I am sure they have them on Ebay.