The only volume of air that matters is what is trapped in the cylinder after the exhaust port closes. Whatever that volume is, there is a certain amount of fuel that is required, and you (or the feedback system) will adjust the H screw to make it so. If you must put more fuel in to account for what gets blown out the exhaust, then so be it but that fuel makes no power - it is lost to the air or turned into heat in the cat.
In the end it is all about the air, and the fuel is the dependent variable - you cannot get more power by forcing more fuel in, that just makes it rich. So anything that increases the amount of air trapped in the cylinder after the exhaust port closes will make more power (i.e. a pump with better volumetric efficiency). On some designs no doubt you can improve the power by removing the divider and mixing the two flows, but this is only because improving the intake flow helps these engines, NOT because putting fuel in the strato path is helpful. If you can improve the flow while keeping the separation it will work too.
I think it is an important distinction, because I see that people are beginning to think introducing fuel into the strato path is a goal, and a way to make more power. It is always about the air, as long as you can get enough fuel (which you can).